Dca16173.1
Annotation
- 3-exons
- f-1
- sp|A5C7D3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_006035#GO:0003676;GO:0004523;GO:0015074#2F1P0C
- Os08t0177800-00 Similar to RNase H domain-containing protein.
- Repeat List (scaffold1799)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16173.1 |
1 |
307 |
406 |
32.75 |
307 |
40 |
2e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5C7D3_VITVI |
44 |
369 |
665 |
49.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16173.1 |
59 |
189 |
406 |
12.56 |
131 |
36 |
1e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0177800-00 |
208 |
351 |
352 |
40.9 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1799 |
Augustus |
mRNA |
23552 |
25398 |
. |
- |
. |
ID=Dca16173.1;Parent=Dca16173 |
| scaffold1799 |
Augustus |
exon |
23552 |
23833 |
. |
- |
. |
ID=Dca16173.1.exon1;Parent=Dca16173.1 |
| scaffold1799 |
Augustus |
exon |
24323 |
24552 |
. |
- |
. |
ID=Dca16173.1.exon2;Parent=Dca16173.1 |
| scaffold1799 |
Augustus |
exon |
24690 |
25398 |
. |
- |
. |
ID=Dca16173.1.exon3;Parent=Dca16173.1 |
