Dca16199.1
Annotation
- 4-exons
- f-1
- sp|B9RD12_RICCO#Ubiquitin-protein ligase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1608630#GO:0005488;GO:0016874#2F0P0C
- Repeat List (scaffold18)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16199.1 |
394 |
527 |
592 |
8.61 |
134 |
37 |
2e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RD12_RICCO |
607 |
736 |
920 |
14.13 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16199.1 |
394 |
527 |
592 |
8.44 |
134 |
36 |
2e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G60350.1 |
606 |
735 |
928 |
14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold18 |
Augustus |
mRNA |
145685 |
149394 |
. |
+ |
. |
ID=Dca16199.1;Parent=Dca16199 |
| scaffold18 |
Augustus |
exon |
145685 |
147061 |
. |
+ |
. |
ID=Dca16199.1.exon1;Parent=Dca16199.1 |
| scaffold18 |
Augustus |
exon |
147156 |
147314 |
. |
+ |
. |
ID=Dca16199.1.exon2;Parent=Dca16199.1 |
| scaffold18 |
Augustus |
exon |
149032 |
149118 |
. |
+ |
. |
ID=Dca16199.1.exon3;Parent=Dca16199.1 |
| scaffold18 |
Augustus |
exon |
149239 |
149394 |
. |
+ |
. |
ID=Dca16199.1.exon4;Parent=Dca16199.1 |
