Carnation DB

Dca16210.1

Annotation

9-exons
f-1
sp|F6GVB6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0021g01340#GO:0005856;GO:0006909#0F1P1C
sp|B9SKK4_RICCO#ELMO domain-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0658160#GO:0005856;GO:0006909#0F1P1C
Repeat List (scaffold18)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16210.1	1	269	269	83.64	269	84	7e-130
Target_name	Start	End	Length	Cov(%)
sp\|F6GVB6_VITVI	1	267	267	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16210.1	1	269	269	78.06	269	78	6e-123
Target_name	Start	End	Length	Cov(%)
AT2G44770.1	1	266	266	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold18	Augus-PASA	mRNA	221759	224950	.	+	.	ID=Dca16210.1;Parent=Dca16210
scaffold18	Augus-PASA	exon	221759	221855	.	+	.	ID=Dca16210.1.exon1;Parent=Dca16210.1
scaffold18	Augus-PASA	exon	222741	222847	.	+	.	ID=Dca16210.1.exon2;Parent=Dca16210.1
scaffold18	Augus-PASA	exon	223382	223450	.	+	.	ID=Dca16210.1.exon3;Parent=Dca16210.1
scaffold18	Augus-PASA	exon	223568	223683	.	+	.	ID=Dca16210.1.exon4;Parent=Dca16210.1
scaffold18	Augus-PASA	exon	223774	223828	.	+	.	ID=Dca16210.1.exon5;Parent=Dca16210.1
scaffold18	Augus-PASA	exon	223918	224038	.	+	.	ID=Dca16210.1.exon6;Parent=Dca16210.1
scaffold18	Augus-PASA	exon	224506	224553	.	+	.	ID=Dca16210.1.exon7;Parent=Dca16210.1
scaffold18	Augus-PASA	exon	224653	224747	.	+	.	ID=Dca16210.1.exon8;Parent=Dca16210.1
scaffold18	Augus-PASA	exon	224849	224950	.	+	.	ID=Dca16210.1.exon9;Parent=Dca16210.1