Carnation DB

Dca16213.1

Annotation

18-exons
f-1
sp|D7KP30_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_887214#GO:0031227;GO:0016757;GO:0006506#1F1P1C
AT1G02145.3 | Symbols: ALG12, EBS4 | homolog of asparagine-linked glycosylation 12 | chr1:404627-408485 FORWARD LENGTH=497
Repeat List (scaffold18)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16213.1	13	439	439	61.5	427	56	8e-153
Target_name	Start	End	Length	Cov(%)
sp\|D7KP30_ARALL	6	491	491	98.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16213.1	13	439	439	61.04	427	56	4e-156
Target_name	Start	End	Length	Cov(%)
AT1G02145.3	12	497	497	97.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold18	Augustus	mRNA	241053	248366	.	+	.	ID=Dca16213.1;Parent=Dca16213
scaffold18	Augustus	exon	241053	241098	.	+	.	ID=Dca16213.1.exon1;Parent=Dca16213.1
scaffold18	Augustus	exon	241191	241276	.	+	.	ID=Dca16213.1.exon2;Parent=Dca16213.1
scaffold18	Augustus	exon	241365	241406	.	+	.	ID=Dca16213.1.exon3;Parent=Dca16213.1
scaffold18	Augustus	exon	241513	241558	.	+	.	ID=Dca16213.1.exon4;Parent=Dca16213.1
scaffold18	Augustus	exon	242244	242330	.	+	.	ID=Dca16213.1.exon5;Parent=Dca16213.1
scaffold18	Augustus	exon	243921	243979	.	+	.	ID=Dca16213.1.exon6;Parent=Dca16213.1
scaffold18	Augus-PASA	exon	244703	244774	.	+	.	ID=Dca16213.1.exon7;Parent=Dca16213.1
scaffold18	Augus-PASA	exon	245558	245621	.	+	.	ID=Dca16213.1.exon8;Parent=Dca16213.1
scaffold18	Augus-PASA	exon	245767	245870	.	+	.	ID=Dca16213.1.exon9;Parent=Dca16213.1
scaffold18	Augus-PASA	exon	246184	246255	.	+	.	ID=Dca16213.1.exon10;Parent=Dca16213.1
scaffold18	Augus-PASA	exon	246428	246514	.	+	.	ID=Dca16213.1.exon11;Parent=Dca16213.1
scaffold18	Augus-PASA	exon	246603	246670	.	+	.	ID=Dca16213.1.exon12;Parent=Dca16213.1
scaffold18	Augus-PASA	exon	247102	247170	.	+	.	ID=Dca16213.1.exon13;Parent=Dca16213.1
scaffold18	Augus-PASA	exon	247259	247341	.	+	.	ID=Dca16213.1.exon14;Parent=Dca16213.1
scaffold18	Augus-PASA	exon	247538	247634	.	+	.	ID=Dca16213.1.exon15;Parent=Dca16213.1
scaffold18	Augus-PASA	exon	247909	247974	.	+	.	ID=Dca16213.1.exon16;Parent=Dca16213.1
scaffold18	Augus-PASA	exon	248107	248200	.	+	.	ID=Dca16213.1.exon17;Parent=Dca16213.1
scaffold18	Augus-PASA	exon	248289	248366	.	+	.	ID=Dca16213.1.exon18;Parent=Dca16213.1