Carnation DB

Dca16223.1

Annotation

8-exons
f-1
sp|F6H5E9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g03420#GO:0004526;GO:0001682#1F1P0C
AT2G47300.2 | Symbols: | ribonuclease Ps | chr2:19418733-19422076 FORWARD LENGTH=826
Repeat List (scaffold18)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16223.1	12	136	743	11.17	125	62	1e-32
Target_name	Start	End	Length	Cov(%)
sp\|F6H5E9_VITVI	13	147	825	16.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16223.1	14	136	743	11.03	123	63	2e-39
Target_name	Start	End	Length	Cov(%)
AT2G47300.2	21	151	826	15.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold18	Augustus	mRNA	324387	329181	.	-	.	ID=Dca16223.1;Parent=Dca16223
scaffold18	Augustus	exon	324387	324585	.	-	.	ID=Dca16223.1.exon1;Parent=Dca16223.1
scaffold18	Augustus	exon	324790	324954	.	-	.	ID=Dca16223.1.exon2;Parent=Dca16223.1
scaffold18	Augustus	exon	325108	325673	.	-	.	ID=Dca16223.1.exon3;Parent=Dca16223.1
scaffold18	Augustus	exon	325755	325863	.	-	.	ID=Dca16223.1.exon4;Parent=Dca16223.1
scaffold18	Augustus	exon	326328	326849	.	-	.	ID=Dca16223.1.exon5;Parent=Dca16223.1
scaffold18	Augustus	exon	326918	327036	.	-	.	ID=Dca16223.1.exon6;Parent=Dca16223.1
scaffold18	Augustus	exon	327131	327275	.	-	.	ID=Dca16223.1.exon7;Parent=Dca16223.1
scaffold18	Augustus	exon	328775	329181	.	-	.	ID=Dca16223.1.exon8;Parent=Dca16223.1