Carnation DB

Dca16234.1

Annotation

12-exons
f-1
sp|D7T3N6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0088g00500#GO:0005737;GO:0004812;GO:0005524;GO:0003676;GO:0006418#3F1P1C
AT4G33760.1 | Symbols: | tRNA synthetase class II (D, K and N) family protein | chr4:16189285-16193260 REVERSE LENGTH=664
Repeat List (scaffold18)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16234.1	1	215	576	22.56	215	59	1e-61
Target_name	Start	End	Length	Cov(%)
sp\|D7T3N6_VITVI	1	204	657	31.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16234.1	21	215	576	19.96	195	58	4e-58
Target_name	Start	End	Length	Cov(%)
AT4G33760.1	15	211	664	29.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold18	Augustus	mRNA	438324	443045	.	-	.	ID=Dca16234.1;Parent=Dca16234
scaffold18	Augustus	exon	438324	438496	.	-	.	ID=Dca16234.1.exon1;Parent=Dca16234.1
scaffold18	Augustus	exon	438584	438641	.	-	.	ID=Dca16234.1.exon2;Parent=Dca16234.1
scaffold18	Augustus	exon	438911	438991	.	-	.	ID=Dca16234.1.exon3;Parent=Dca16234.1
scaffold18	Augustus	exon	439072	439170	.	-	.	ID=Dca16234.1.exon4;Parent=Dca16234.1
scaffold18	Augustus	exon	439265	439336	.	-	.	ID=Dca16234.1.exon5;Parent=Dca16234.1
scaffold18	Augustus	exon	439430	439617	.	-	.	ID=Dca16234.1.exon6;Parent=Dca16234.1
scaffold18	Augustus	exon	439687	439882	.	-	.	ID=Dca16234.1.exon7;Parent=Dca16234.1
scaffold18	Augustus	exon	440188	440310	.	-	.	ID=Dca16234.1.exon8;Parent=Dca16234.1
scaffold18	Augustus	exon	440398	440518	.	-	.	ID=Dca16234.1.exon9;Parent=Dca16234.1
scaffold18	Augustus	exon	441594	441703	.	-	.	ID=Dca16234.1.exon10;Parent=Dca16234.1
scaffold18	Augustus	exon	441893	442036	.	-	.	ID=Dca16234.1.exon11;Parent=Dca16234.1
scaffold18	Augustus	exon	442680	443045	.	-	.	ID=Dca16234.1.exon12;Parent=Dca16234.1