Carnation DB

Dca1625.1

Annotation

5-exons
f-1
sp|E5GCP6_CUCME#Ty3-gypsy retrotransposon protein#Cucumis melo subsp melo#unknown#unknown#0F0P0C
Repeat List (scaffold105)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1625.1	138	441	851	17.15	304	47	3e-68
Target_name	Start	End	Length	Cov(%)
sp\|E5GCP6_CUCME	44	339	517	57.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1625.1	525	828	851	11.63	304	32	8e-34
Target_name	Start	End	Length	Cov(%)
Os06t0224650-01	65	365	407	73.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold105	Augustus	mRNA	194529	202053	.	-	.	ID=Dca1625.1;Parent=Dca1625
scaffold105	Augustus	exon	194529	195574	.	-	.	ID=Dca1625.1.exon1;Parent=Dca1625.1
scaffold105	Augustus	exon	197498	197684	.	-	.	ID=Dca1625.1.exon2;Parent=Dca1625.1
scaffold105	Augustus	exon	200012	200916	.	-	.	ID=Dca1625.1.exon3;Parent=Dca1625.1
scaffold105	Augustus	exon	201022	201303	.	-	.	ID=Dca1625.1.exon4;Parent=Dca1625.1
scaffold105	Augustus	exon	201918	202053	.	-	.	ID=Dca1625.1.exon5;Parent=Dca1625.1