Carnation DB

Dca16258.1

Annotation

7-exons
f-1
sp|D7LUU2_ARALL#Ump synthase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_906854#GO:0004588;GO:0004590;GO:0006207;GO:0044205#2F2P0C
Repeat List (scaffold180)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16258.1	9	481	481	78.58	473	80	0
Target_name	Start	End	Length	Cov(%)
sp\|D7LUU2_ARALL	3	475	476	99.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16258.1	9	481	481	79	473	81	0
Target_name	Start	End	Length	Cov(%)
AT3G54470.1	3	475	476	99.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold180	Augus-PASA	mRNA	101997	106551	.	+	.	ID=Dca16258.1;Parent=Dca16258
scaffold180	Augus-PASA	exon	101997	102466	.	+	.	ID=Dca16258.1.exon1;Parent=Dca16258.1
scaffold180	Augus-PASA	exon	103733	104069	.	+	.	ID=Dca16258.1.exon2;Parent=Dca16258.1
scaffold180	Augus-PASA	exon	104789	104872	.	+	.	ID=Dca16258.1.exon3;Parent=Dca16258.1
scaffold180	Augus-PASA	exon	105157	105239	.	+	.	ID=Dca16258.1.exon4;Parent=Dca16258.1
scaffold180	Augus-PASA	exon	105327	105414	.	+	.	ID=Dca16258.1.exon5;Parent=Dca16258.1
scaffold180	Augus-PASA	exon	105506	105760	.	+	.	ID=Dca16258.1.exon6;Parent=Dca16258.1
scaffold180	Augus-PASA	exon	106423	106551	.	+	.	ID=Dca16258.1.exon7;Parent=Dca16258.1