Carnation DB

Dca1627.1

Annotation

8-exons
f-1
sp|F6HKQ2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g02610#GO:0005509#1F0P0C
AT5G06260.1 | Symbols: | TLD-domain containing nucleolar protein | chr5:1902755-1904835 REVERSE LENGTH=424
Repeat List (scaffold105)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1627.1	1	416	417	64.74	416	65	7e-159
Target_name	Start	End	Length	Cov(%)
sp\|F6HKQ2_VITVI	19	439	440	95.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1627.1	1	417	417	61.39	417	61	7e-151
Target_name	Start	End	Length	Cov(%)
AT5G06260.1	1	423	424	99.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold105	Augus-PASA	mRNA	217730	221200	.	-	.	ID=Dca1627.1;Parent=Dca1627
scaffold105	Augus-PASA	exon	217730	218032	.	-	.	ID=Dca1627.1.exon1;Parent=Dca1627.1
scaffold105	Augustus	exon	218311	218494	.	-	.	ID=Dca1627.1.exon2;Parent=Dca1627.1
scaffold105	Augus-PASA	exon	218722	218899	.	-	.	ID=Dca1627.1.exon3;Parent=Dca1627.1
scaffold105	Augus-PASA	exon	219162	219403	.	-	.	ID=Dca1627.1.exon4;Parent=Dca1627.1
scaffold105	Augus-PASA	exon	220453	220538	.	-	.	ID=Dca1627.1.exon5;Parent=Dca1627.1
scaffold105	Augus-PASA	exon	220644	220748	.	-	.	ID=Dca1627.1.exon6;Parent=Dca1627.1
scaffold105	Augus-PASA	exon	220867	220969	.	-	.	ID=Dca1627.1.exon7;Parent=Dca1627.1
scaffold105	Augus-PASA	exon	221148	221200	.	-	.	ID=Dca1627.1.exon8;Parent=Dca1627.1