Carnation DB

Dca16293.1

Annotation

6-exons
f-1
sp|B9RKX6_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1564050#GO:0003824;GO:0006284#1F1P0C
AT3G07930.3 | Symbols: | DNA glycosylase superfamily protein | chr3:2526720-2528416 FORWARD LENGTH=445
Repeat List (scaffold1802)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16293.1	364	504	874	9.38	141	59	4e-42
Target_name	Start	End	Length	Cov(%)
sp\|B9RKX6_RICCO	439	579	608	23.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16293.1	353	504	874	8.81	152	50	8e-37
Target_name	Start	End	Length	Cov(%)
AT3G07930.3	263	417	445	34.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1802	Augustus	mRNA	6616	19705	.	+	.	ID=Dca16293.1;Parent=Dca16293
scaffold1802	Augustus	exon	6616	7902	.	+	.	ID=Dca16293.1.exon1;Parent=Dca16293.1
scaffold1802	Augustus	exon	8713	8909	.	+	.	ID=Dca16293.1.exon2;Parent=Dca16293.1
scaffold1802	Augustus	exon	11625	11716	.	+	.	ID=Dca16293.1.exon3;Parent=Dca16293.1
scaffold1802	Augustus	exon	12928	13170	.	+	.	ID=Dca16293.1.exon4;Parent=Dca16293.1
scaffold1802	Augustus	exon	18804	19114	.	+	.	ID=Dca16293.1.exon5;Parent=Dca16293.1
scaffold1802	Augustus	exon	19211	19705	.	+	.	ID=Dca16293.1.exon6;Parent=Dca16293.1