Dca16315.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold1804)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16315.1 |
61 |
865 |
896 |
45.64 |
805 |
51 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
11 |
785 |
1717 |
45.13 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16315.1 |
576 |
668 |
896 |
3.79 |
93 |
37 |
3e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1804 |
Augustus |
mRNA |
32004 |
34790 |
. |
- |
. |
ID=Dca16315.1;Parent=Dca16315 |
| scaffold1804 |
Augustus |
exon |
32004 |
33073 |
. |
- |
. |
ID=Dca16315.1.exon1;Parent=Dca16315.1 |
| scaffold1804 |
Augustus |
exon |
33170 |
34790 |
. |
- |
. |
ID=Dca16315.1.exon2;Parent=Dca16315.1 |
