Carnation DB

Dca16353.1

Annotation

5-exons
f-1
sp|Q10G10_ORYSJ#Transposon protein, putative, Mutator sub-class#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g44590#GO:0003677;GO:0004803;GO:0008270;GO:0006313#3F1P0C
Repeat List (scaffold1807)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16353.1	122	303	304	24.34	182	36	1e-31
Target_name	Start	End	Length	Cov(%)
sp\|Q10G10_ORYSJ	420	625	983	20.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16353.1	129	256	304	18.75	128	36	7e-21
Target_name	Start	End	Length	Cov(%)
Os06t0704400-02	263	418	805	19.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1807	Augustus	mRNA	30145	32312	.	+	.	ID=Dca16353.1;Parent=Dca16353
scaffold1807	Augustus	exon	30145	30207	.	+	.	ID=Dca16353.1.exon1;Parent=Dca16353.1
scaffold1807	Augustus	exon	30290	30570	.	+	.	ID=Dca16353.1.exon2;Parent=Dca16353.1
scaffold1807	Augustus	exon	31125	31273	.	+	.	ID=Dca16353.1.exon3;Parent=Dca16353.1
scaffold1807	Augustus	exon	31361	31545	.	+	.	ID=Dca16353.1.exon4;Parent=Dca16353.1
scaffold1807	Augustus	exon	32076	32312	.	+	.	ID=Dca16353.1.exon5;Parent=Dca16353.1