Dca16397.1
Annotation
- 4-exons
- f-1
- sp|B9I5I2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_243078#GO:0005622;GO:0008270#1F0P1C
- Os10t0500600-01 Zinc finger, C2H2-like domain containing protein.
- Repeat List (scaffold181)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16397.1 |
3 |
503 |
531 |
44.63 |
501 |
46 |
2e-119
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I5I2_POPTR |
4 |
492 |
498 |
98.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16397.1 |
4 |
522 |
531 |
43.12 |
519 |
44 |
4e-114
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G28260.1 |
5 |
515 |
516 |
99.03 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold181 |
Augustus |
mRNA |
59216 |
61443 |
. |
- |
. |
ID=Dca16397.1;Parent=Dca16397 |
| scaffold181 |
Augustus |
exon |
59216 |
59290 |
. |
- |
. |
ID=Dca16397.1.exon1;Parent=Dca16397.1 |
| scaffold181 |
Augustus |
exon |
59379 |
59495 |
. |
- |
. |
ID=Dca16397.1.exon2;Parent=Dca16397.1 |
| scaffold181 |
Augustus |
exon |
59590 |
59895 |
. |
- |
. |
ID=Dca16397.1.exon3;Parent=Dca16397.1 |
| scaffold181 |
Augus-PASA |
exon |
60346 |
61443 |
. |
- |
. |
ID=Dca16397.1.exon4;Parent=Dca16397.1 |
