Carnation DB

Dca16408.1

Annotation

5-exons
f-1
sp|Q940P5_ARATH#At2g20740/F5H14.29#Arabidopsis thaliana (Mouse-ear cress)#OrderedLocusNames=At2g20740#GO:0016021#0F0P1C
Repeat List (scaffold181)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16408.1	1	184	185	55.13	184	56	4e-63
Target_name	Start	End	Length	Cov(%)
sp\|Q940P5_ARATH	22	205	221	83.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16408.1	1	184	185	55.13	184	56	4e-64
Target_name	Start	End	Length	Cov(%)
AT2G20740.1	22	205	221	83.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold181	Augus-PASA	mRNA	172722	174651	.	+	.	ID=Dca16408.1;Parent=Dca16408
scaffold181	Augus-PASA	exon	172722	172825	.	+	.	ID=Dca16408.1.exon1;Parent=Dca16408.1
scaffold181	Augus-PASA	exon	173433	173532	.	+	.	ID=Dca16408.1.exon2;Parent=Dca16408.1
scaffold181	Augus-PASA	exon	173714	173794	.	+	.	ID=Dca16408.1.exon3;Parent=Dca16408.1
scaffold181	Augus-PASA	exon	173872	173976	.	+	.	ID=Dca16408.1.exon4;Parent=Dca16408.1
scaffold181	Augustus	exon	174484	174651	.	+	.	ID=Dca16408.1.exon5;Parent=Dca16408.1