Dca16412.1
Annotation
- 4-exons
- f-1
- sp|B9N2B8_POPTR#Putative uncharacterized protein PtrEXPB2#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=PtrEXPB2#GO:0005576;GO:0019953#0F1P1C
- sp|B9RW20_RICCO#Beta-expansin 3, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1175460#GO:0005576;GO:0019953#0F1P1C
- Repeat List (scaffold181)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16412.1 |
10 |
194 |
254 |
57.08 |
185 |
79 |
3e-84
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N2B8_POPTR |
18 |
202 |
267 |
69.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16412.1 |
19 |
194 |
254 |
54.33 |
176 |
78 |
1e-76
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G28250.1 |
23 |
197 |
264 |
66.28 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold181 |
Augustus |
mRNA |
195890 |
201817 |
. |
+ |
. |
ID=Dca16412.1;Parent=Dca16412 |
| scaffold181 |
Augustus |
exon |
195890 |
196034 |
. |
+ |
. |
ID=Dca16412.1.exon1;Parent=Dca16412.1 |
| scaffold181 |
Augustus |
exon |
197389 |
197695 |
. |
+ |
. |
ID=Dca16412.1.exon2;Parent=Dca16412.1 |
| scaffold181 |
Augustus |
exon |
198457 |
198586 |
. |
+ |
. |
ID=Dca16412.1.exon3;Parent=Dca16412.1 |
| scaffold181 |
Augustus |
exon |
201635 |
201817 |
. |
+ |
. |
ID=Dca16412.1.exon4;Parent=Dca16412.1 |
