Carnation DB

Dca16443.1

Annotation

9-exons
f-1
sp|C6TJP0_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0005622;GO:0004221;GO:0006511#1F1P1C
AT4G17510.1 | Symbols: UCH3 | ubiquitin C-terminal hydrolase 3 | chr4:9767114-9768648 REVERSE LENGTH=234
Repeat List (scaffold1812)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16443.1	6	229	229	75.54	224	78	8e-105
Target_name	Start	End	Length	Cov(%)
sp\|C6TJP0_SOYBN	9	232	236	94.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16443.1	2	228	229	72.05	227	73	2e-98
Target_name	Start	End	Length	Cov(%)
AT4G17510.1	5	233	234	97.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1812	Augus-PASA	mRNA	6633	10480	.	-	.	ID=Dca16443.1;Parent=Dca16443
scaffold1812	Augus-PASA	exon	6633	6719	.	-	.	ID=Dca16443.1.exon1;Parent=Dca16443.1
scaffold1812	Augus-PASA	exon	7449	7525	.	-	.	ID=Dca16443.1.exon2;Parent=Dca16443.1
scaffold1812	Augus-PASA	exon	7621	7669	.	-	.	ID=Dca16443.1.exon3;Parent=Dca16443.1
scaffold1812	Augus-PASA	exon	7965	8039	.	-	.	ID=Dca16443.1.exon4;Parent=Dca16443.1
scaffold1812	Augus-PASA	exon	8122	8180	.	-	.	ID=Dca16443.1.exon5;Parent=Dca16443.1
scaffold1812	Augus-PASA	exon	8435	8540	.	-	.	ID=Dca16443.1.exon6;Parent=Dca16443.1
scaffold1812	Augus-PASA	exon	9577	9615	.	-	.	ID=Dca16443.1.exon7;Parent=Dca16443.1
scaffold1812	Augus-PASA	exon	9893	10024	.	-	.	ID=Dca16443.1.exon8;Parent=Dca16443.1
scaffold1812	Augus-PASA	exon	10415	10480	.	-	.	ID=Dca16443.1.exon9;Parent=Dca16443.1