Carnation DB

Dca1645.1

Annotation

9-exons
f-1
sp|D7T0N7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0065g00450#GO:0005737;GO:0005634#0F0P2C
sp|B9SAC2_RICCO#Adhesion regulating molecule, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1237900#GO:0005737;GO:0005634;GO:0000166#1F0P2C
Repeat List (scaffold1050)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1645.1	2	172	180	69.44	171	73	6e-70
Target_name	Start	End	Length	Cov(%)
sp\|D7T0N7_VITVI	3	174	320	53.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1645.1	3	165	180	56.66	163	63	2e-57
Target_name	Start	End	Length	Cov(%)
AT2G26590.1	2	164	300	54.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1050	Augustus	mRNA	87733	97790	.	-	.	ID=Dca1645.1;Parent=Dca1645
scaffold1050	Augustus	exon	87733	87786	.	-	.	ID=Dca1645.1.exon1;Parent=Dca1645.1
scaffold1050	Augustus	exon	93227	93266	.	-	.	ID=Dca1645.1.exon2;Parent=Dca1645.1
scaffold1050	Augustus	exon	94049	94127	.	-	.	ID=Dca1645.1.exon3;Parent=Dca1645.1
scaffold1050	Augustus	exon	94698	94764	.	-	.	ID=Dca1645.1.exon4;Parent=Dca1645.1
scaffold1050	Augustus	exon	94845	94919	.	-	.	ID=Dca1645.1.exon5;Parent=Dca1645.1
scaffold1050	Augustus	exon	95012	95050	.	-	.	ID=Dca1645.1.exon6;Parent=Dca1645.1
scaffold1050	Augustus	exon	95856	95915	.	-	.	ID=Dca1645.1.exon7;Parent=Dca1645.1
scaffold1050	Augustus	exon	96030	96122	.	-	.	ID=Dca1645.1.exon8;Parent=Dca1645.1
scaffold1050	Augustus	exon	97755	97790	.	-	.	ID=Dca1645.1.exon9;Parent=Dca1645.1