Carnation DB

Dca16458.1

Annotation

12-exons
f-1
sp|D7TQT9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g00970#unknown#0F0P0C
AT2G40820.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT3G56480.1); Has 203 Blast hits to 195 proteins in 64 species: Archae - 3; Bacteria - 13; Metazoa - 26; Fungi - 15; Plants - 101; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). | chr2:17036768-17039474 REVERSE LENGTH=492
Repeat List (scaffold1813)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16458.1	1	495	495	71.51	495	72	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TQT9_VITVI	1	491	491	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16458.1	1	493	495	60.4	493	61	8e-177
Target_name	Start	End	Length	Cov(%)
AT2G40820.1	1	492	492	100

seqname	source	feature	start	end	score	strand	frame	group
scaffold1813	Augustus	mRNA	36221	40069	.	+	.	ID=Dca16458.1;Parent=Dca16458
scaffold1813	Augustus	exon	36221	36517	.	+	.	ID=Dca16458.1.exon1;Parent=Dca16458.1
scaffold1813	Augustus	exon	36601	36729	.	+	.	ID=Dca16458.1.exon2;Parent=Dca16458.1
scaffold1813	Augustus	exon	36960	37052	.	+	.	ID=Dca16458.1.exon3;Parent=Dca16458.1
scaffold1813	Augustus	exon	37313	37453	.	+	.	ID=Dca16458.1.exon4;Parent=Dca16458.1
scaffold1813	Augustus	exon	37618	37686	.	+	.	ID=Dca16458.1.exon5;Parent=Dca16458.1
scaffold1813	Augustus	exon	38016	38099	.	+	.	ID=Dca16458.1.exon6;Parent=Dca16458.1
scaffold1813	Augustus	exon	38276	38456	.	+	.	ID=Dca16458.1.exon7;Parent=Dca16458.1
scaffold1813	Augustus	exon	38711	38827	.	+	.	ID=Dca16458.1.exon8;Parent=Dca16458.1
scaffold1813	Augustus	exon	38904	38962	.	+	.	ID=Dca16458.1.exon9;Parent=Dca16458.1
scaffold1813	Augustus	exon	39124	39258	.	+	.	ID=Dca16458.1.exon10;Parent=Dca16458.1
scaffold1813	Augustus	exon	39545	39694	.	+	.	ID=Dca16458.1.exon11;Parent=Dca16458.1
scaffold1813	Augustus	exon	40037	40069	.	+	.	ID=Dca16458.1.exon12;Parent=Dca16458.1