Carnation DB

Dca16470.1

Annotation

6-exons
f-1
sp|B9GLE9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_547603#GO:0004045#1F0P0C
AT5G19830.1 | Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:6703383-6705125 FORWARD LENGTH=219
Repeat List (scaffold1814)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16470.1	1	165	171	70.76	165	58	9e-58
Target_name	Start	End	Length	Cov(%)
sp\|B9GLE9_POPTR	1	208	210	99.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16470.1	28	167	171	59.64	140	65	2e-53
Target_name	Start	End	Length	Cov(%)
AT5G19830.1	62	218	219	71.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1814	Augustus	mRNA	15172	17432	.	-	.	ID=Dca16470.1;Parent=Dca16470
scaffold1814	Augustus	exon	15172	15315	.	-	.	ID=Dca16470.1.exon1;Parent=Dca16470.1
scaffold1814	Augustus	exon	15737	15813	.	-	.	ID=Dca16470.1.exon2;Parent=Dca16470.1
scaffold1814	Augustus	exon	15910	15968	.	-	.	ID=Dca16470.1.exon3;Parent=Dca16470.1
scaffold1814	Augustus	exon	16181	16254	.	-	.	ID=Dca16470.1.exon4;Parent=Dca16470.1
scaffold1814	Augustus	exon	16743	16810	.	-	.	ID=Dca16470.1.exon5;Parent=Dca16470.1
scaffold1814	Augustus	exon	17339	17432	.	-	.	ID=Dca16470.1.exon6;Parent=Dca16470.1