Dca1659.1
Annotation
- 2-exons
- f-1
- sp|Q9XIL8_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g15870#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1051)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1659.1 |
3 |
483 |
483 |
37.68 |
481 |
36 |
7e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9XIL8_ARATH |
615 |
1115 |
1264 |
39.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1659.1 |
242 |
482 |
483 |
21.73 |
241 |
43 |
5e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
206 |
450 |
1262 |
19.41 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1051 |
Augustus |
mRNA |
17313 |
19208 |
. |
- |
. |
ID=Dca1659.1;Parent=Dca1659 |
| scaffold1051 |
Augustus |
exon |
17313 |
18040 |
. |
- |
. |
ID=Dca1659.1.exon1;Parent=Dca1659.1 |
| scaffold1051 |
Augustus |
exon |
18485 |
19208 |
. |
- |
. |
ID=Dca1659.1.exon2;Parent=Dca1659.1 |
