Carnation DB

Dca16675.1

Annotation

6-exons
f-1
sp|C6SY42_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0005853;GO:0003746#1F0P1C
AT5G12110.1 | Symbols: | Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6 | chr5:3914483-3915732 FORWARD LENGTH=228
Repeat List (scaffold183)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16675.1	1	227	227	76.21	227	77	3e-88
Target_name	Start	End	Length	Cov(%)
sp\|C6SY42_SOYBN	1	224	224	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16675.1	1	227	227	71.8	227	72	3e-82
Target_name	Start	End	Length	Cov(%)
AT5G12110.1	1	228	228	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold183	Augus-PASA	mRNA	185338	188256	.	+	.	ID=Dca16675.1;Parent=Dca16675
scaffold183	Augus-PASA	exon	185338	185423	.	+	.	ID=Dca16675.1.exon1;Parent=Dca16675.1
scaffold183	Augus-PASA	exon	186322	186438	.	+	.	ID=Dca16675.1.exon2;Parent=Dca16675.1
scaffold183	Augus-PASA	exon	187191	187269	.	+	.	ID=Dca16675.1.exon3;Parent=Dca16675.1
scaffold183	Augus-PASA	exon	187405	187528	.	+	.	ID=Dca16675.1.exon4;Parent=Dca16675.1
scaffold183	Augus-PASA	exon	187880	187993	.	+	.	ID=Dca16675.1.exon5;Parent=Dca16675.1
scaffold183	Augus-PASA	exon	188093	188256	.	+	.	ID=Dca16675.1.exon6;Parent=Dca16675.1