Carnation DB

Dca1670.1

Annotation

6-exons
f-1
sp|D7MPB9_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_495017#GO:0005634;GO:0003684;GO:0006289#1F1P1C
AT5G49570.1 | Symbols: AtPNG1, PNG1 | peptide-N-glycanase 1 | chr5:20112071-20116125 REVERSE LENGTH=721
Repeat List (scaffold10514)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1670.1	1	172	374	28.6	172	63	2e-54
Target_name	Start	End	Length	Cov(%)
sp\|D7MPB9_ARALL	1	159	721	22.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1670.1	1	172	374	28.07	172	62	4e-55
Target_name	Start	End	Length	Cov(%)
AT5G49570.1	1	159	721	22.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10514	Augustus	mRNA	2901	6447	.	-	.	ID=Dca1670.1;Parent=Dca1670
scaffold10514	Augustus	exon	2901	3509	.	-	.	ID=Dca1670.1.exon1;Parent=Dca1670.1
scaffold10514	Augustus	exon	4620	4709	.	-	.	ID=Dca1670.1.exon2;Parent=Dca1670.1
scaffold10514	Augustus	exon	4795	4893	.	-	.	ID=Dca1670.1.exon3;Parent=Dca1670.1
scaffold10514	Augustus	exon	5932	6126	.	-	.	ID=Dca1670.1.exon4;Parent=Dca1670.1
scaffold10514	Augustus	exon	6207	6260	.	-	.	ID=Dca1670.1.exon5;Parent=Dca1670.1
scaffold10514	Augustus	exon	6370	6447	.	-	.	ID=Dca1670.1.exon6;Parent=Dca1670.1