Carnation DB

Dca1676.1

Annotation

6-exons
f-1
sp|F6H5D8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g03580#GO:0005524;GO:0004674;GO:0005529#3F0P0C
sp|G7IRA6_MEDTR#Serine/threonine protein kinase cdk9#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_2g085200#GO:0005524;GO:0004674#2F0P0C
Repeat List (scaffold10517)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1676.1	1	348	427	35.83	348	44	2e-65
Target_name	Start	End	Length	Cov(%)
sp\|F6H5D8_VITVI	332	683	1406	25.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1676.1	1	366	427	31.61	366	37	1e-55
Target_name	Start	End	Length	Cov(%)
AT1G53050.1	341	689	694	50.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10517	Augus-PASA	mRNA	1069	5692	.	+	.	ID=Dca1676.1;Parent=Dca1676
scaffold10517	Augus-PASA	exon	1069	1296	.	+	.	ID=Dca1676.1.exon1;Parent=Dca1676.1
scaffold10517	Augus-PASA	exon	1390	1490	.	+	.	ID=Dca1676.1.exon2;Parent=Dca1676.1
scaffold10517	Augus-PASA	exon	2044	2158	.	+	.	ID=Dca1676.1.exon3;Parent=Dca1676.1
scaffold10517	Augus-PASA	exon	3006	3455	.	+	.	ID=Dca1676.1.exon4;Parent=Dca1676.1
scaffold10517	Augustus	exon	3616	3776	.	+	.	ID=Dca1676.1.exon5;Parent=Dca1676.1
scaffold10517	Augustus	exon	5464	5692	.	+	.	ID=Dca1676.1.exon6;Parent=Dca1676.1