Dca1678.1
Annotation
- 2-exons
- f-1
- sp|B9IPB9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_573736#GO:0005488#1F0P0C
- AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:7966066-7967925 REVERSE LENGTH=619
- Repeat List (scaffold1052)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1678.1 |
24 |
214 |
342 |
18.71 |
191 |
33 |
2e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IPB9_POPTR |
69 |
263 |
586 |
33.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1678.1 |
1 |
212 |
342 |
21.34 |
212 |
34 |
8e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G22470.1 |
236 |
450 |
619 |
34.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1052 |
Augustus |
mRNA |
24906 |
26308 |
. |
+ |
. |
ID=Dca1678.1;Parent=Dca1678 |
| scaffold1052 |
Augustus |
exon |
24906 |
25630 |
. |
+ |
. |
ID=Dca1678.1.exon1;Parent=Dca1678.1 |
| scaffold1052 |
Augustus |
exon |
26005 |
26308 |
. |
+ |
. |
ID=Dca1678.1.exon2;Parent=Dca1678.1 |
