Carnation DB

Dca1682.1

Annotation

17-exons
f-1
sp|F6HJ58_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0087g00070#GO:0005622;GO:0005524;GO:0008026;GO:0003676;GO:0006310#3F1P1C
AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 | chr1:11232422-11237412 FORWARD LENGTH=705
Repeat List (scaffold1052)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1682.1	1	632	654	73.39	632	71	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HJ58_VITVI	1	684	747	91.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1682.1	5	653	654	65.29	649	61	0
Target_name	Start	End	Length	Cov(%)
AT1G31360.1	3	703	705	99.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1052	Augustus	mRNA	68726	78272	.	-	.	ID=Dca1682.1;Parent=Dca1682
scaffold1052	Augustus	exon	68726	68908	.	-	.	ID=Dca1682.1.exon1;Parent=Dca1682.1
scaffold1052	Augustus	exon	69281	69498	.	-	.	ID=Dca1682.1.exon2;Parent=Dca1682.1
scaffold1052	Augustus	exon	70577	70684	.	-	.	ID=Dca1682.1.exon3;Parent=Dca1682.1
scaffold1052	Augustus	exon	71040	71151	.	-	.	ID=Dca1682.1.exon4;Parent=Dca1682.1
scaffold1052	Augustus	exon	71424	71489	.	-	.	ID=Dca1682.1.exon5;Parent=Dca1682.1
scaffold1052	Augustus	exon	71605	71682	.	-	.	ID=Dca1682.1.exon6;Parent=Dca1682.1
scaffold1052	Augustus	exon	71929	71981	.	-	.	ID=Dca1682.1.exon7;Parent=Dca1682.1
scaffold1052	Augustus	exon	72808	72841	.	-	.	ID=Dca1682.1.exon8;Parent=Dca1682.1
scaffold1052	Augustus	exon	72928	72964	.	-	.	ID=Dca1682.1.exon9;Parent=Dca1682.1
scaffold1052	Augustus	exon	73390	73478	.	-	.	ID=Dca1682.1.exon10;Parent=Dca1682.1
scaffold1052	Augustus	exon	74271	74393	.	-	.	ID=Dca1682.1.exon11;Parent=Dca1682.1
scaffold1052	Augustus	exon	74476	74580	.	-	.	ID=Dca1682.1.exon12;Parent=Dca1682.1
scaffold1052	Augustus	exon	74694	74798	.	-	.	ID=Dca1682.1.exon13;Parent=Dca1682.1
scaffold1052	Augustus	exon	74994	75209	.	-	.	ID=Dca1682.1.exon14;Parent=Dca1682.1
scaffold1052	Augustus	exon	75286	75432	.	-	.	ID=Dca1682.1.exon15;Parent=Dca1682.1
scaffold1052	Augustus	exon	76597	76817	.	-	.	ID=Dca1682.1.exon16;Parent=Dca1682.1
scaffold1052	Augustus	exon	78203	78272	.	-	.	ID=Dca1682.1.exon17;Parent=Dca1682.1
scaffold1052	Augustus	mRNA	68726	71946	.	-	.	ID=Dca1682.2;Parent=Dca1682
scaffold1052	Augustus	exon	68726	68908	.	-	.	ID=Dca1682.2.exon1;Parent=Dca1682.2
scaffold1052	Augustus	exon	69281	69498	.	-	.	ID=Dca1682.2.exon2;Parent=Dca1682.2
scaffold1052	Augustus	exon	70577	70684	.	-	.	ID=Dca1682.2.exon3;Parent=Dca1682.2
scaffold1052	Augustus	exon	71040	71151	.	-	.	ID=Dca1682.2.exon4;Parent=Dca1682.2
scaffold1052	Augustus	exon	71424	71489	.	-	.	ID=Dca1682.2.exon5;Parent=Dca1682.2
scaffold1052	Augustus	exon	71605	71682	.	-	.	ID=Dca1682.2.exon6;Parent=Dca1682.2
scaffold1052	Augustus	exon	71929	71946	.	-	.	ID=Dca1682.2.exon7;Parent=Dca1682.2