Carnation DB

Dca1687.1

Annotation

5-exons
f-1
sp|B9HA49_POPTR#Rna-dependent RNA polymerase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=RDR906#GO:0003968#1F0P0C
Repeat List (scaffold10523)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1687.1	1	783	902	56.31	783	65	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HA49_POPTR	1	779	1198	65.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1687.1	1	783	902	52.43	783	61	0
Target_name	Start	End	Length	Cov(%)
AT3G49500.1	1	778	1196	65.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10523	Augustus	mRNA	7180	12399	.	+	.	ID=Dca1687.1;Parent=Dca1687
scaffold10523	Augustus	exon	7180	9526	.	+	.	ID=Dca1687.1.exon1;Parent=Dca1687.1
scaffold10523	Augustus	exon	10476	10540	.	+	.	ID=Dca1687.1.exon2;Parent=Dca1687.1
scaffold10523	Augustus	exon	11441	11483	.	+	.	ID=Dca1687.1.exon3;Parent=Dca1687.1
scaffold10523	Augustus	exon	11584	11667	.	+	.	ID=Dca1687.1.exon4;Parent=Dca1687.1
scaffold10523	Augustus	exon	12230	12399	.	+	.	ID=Dca1687.1.exon5;Parent=Dca1687.1