Carnation DB

Dca16928.1

Annotation

5-exons
f-1
sp|F6I1E7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0045g00630#GO:0005840;GO:0003735;GO:0006412#1F1P1C
AT1G80620.1 | Symbols: | S15/NS1, RNA-binding protein | chr1:30305404-30307182 FORWARD LENGTH=414
Repeat List (scaffold185)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16928.1	65	422	423	41.37	358	46	2e-76
Target_name	Start	End	Length	Cov(%)
sp\|F6I1E7_VITVI	96	444	444	78.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca16928.1	54	421	423	38.77	368	43	2e-63
Target_name	Start	End	Length	Cov(%)
AT1G80620.1	79	413	414	80.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold185	Augustus	mRNA	153779	156510	.	+	.	ID=Dca16928.1;Parent=Dca16928
scaffold185	Augustus	exon	153779	154676	.	+	.	ID=Dca16928.1.exon1;Parent=Dca16928.1
scaffold185	Augustus	exon	155404	155465	.	+	.	ID=Dca16928.1.exon2;Parent=Dca16928.1
scaffold185	Augustus	exon	155608	155719	.	+	.	ID=Dca16928.1.exon3;Parent=Dca16928.1
scaffold185	Augustus	exon	156006	156058	.	+	.	ID=Dca16928.1.exon4;Parent=Dca16928.1
scaffold185	Augustus	exon	156364	156510	.	+	.	ID=Dca16928.1.exon5;Parent=Dca16928.1