Carnation DB

Dca17046.1

Annotation

6-exons
f-1
sp|B9H6K0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_716296#GO:0005622;GO:0005525;GO:0004871;GO:0007264#2F1P1C
sp|B9SG01_RICCO#ADP-ribosylation factor, arf, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1153480#GO:0005622;GO:0005525;GO:0007264#1F1P1C
Repeat List (scaffold1859)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17046.1	1	182	182	87.36	182	88	1e-92
Target_name	Start	End	Length	Cov(%)
sp\|B9H6K0_POPTR	1	181	181	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17046.1	1	182	182	86.26	182	87	1e-90
Target_name	Start	End	Length	Cov(%)
Os03t0811900-01	1	181	182	99.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1859	Augus-PASA	mRNA	23658	25567	.	+	.	ID=Dca17046.1;Parent=Dca17046
scaffold1859	Augus-PASA	exon	23658	23805	.	+	.	ID=Dca17046.1.exon1;Parent=Dca17046.1
scaffold1859	Augus-PASA	exon	24587	24657	.	+	.	ID=Dca17046.1.exon2;Parent=Dca17046.1
scaffold1859	Augus-PASA	exon	24814	24933	.	+	.	ID=Dca17046.1.exon3;Parent=Dca17046.1
scaffold1859	Augus-PASA	exon	25022	25143	.	+	.	ID=Dca17046.1.exon4;Parent=Dca17046.1
scaffold1859	Augus-PASA	exon	25383	25464	.	+	.	ID=Dca17046.1.exon5;Parent=Dca17046.1
scaffold1859	Augus-PASA	exon	25562	25567	.	+	.	ID=Dca17046.1.exon6;Parent=Dca17046.1