Dca1706.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold1053)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1706.1 |
30 |
842 |
876 |
45.31 |
813 |
48 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
9 |
789 |
1717 |
45.48 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1706.1 |
493 |
627 |
876 |
5.02 |
135 |
33 |
2e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
63 |
189 |
192 |
66.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1053 |
Augustus |
mRNA |
81214 |
85939 |
. |
- |
. |
ID=Dca1706.1;Parent=Dca1706 |
| scaffold1053 |
Augustus |
exon |
81214 |
81641 |
. |
- |
. |
ID=Dca1706.1.exon1;Parent=Dca1706.1 |
| scaffold1053 |
Augustus |
exon |
83660 |
84424 |
. |
- |
. |
ID=Dca1706.1.exon2;Parent=Dca1706.1 |
| scaffold1053 |
Augustus |
exon |
84502 |
85939 |
. |
- |
. |
ID=Dca1706.1.exon3;Parent=Dca1706.1 |
