Dca17086.1
Annotation
- 2-exons
- f-224
- sp|A9PIP3_9ROSI#Putative uncharacterized protein#Populus trichocarpa x Populus deltoides#unknown#GO:0008270#1F0P0C
- AT2G23780.1 | Symbols: | RING/U-box superfamily protein | chr2:10123551-10124234 REVERSE LENGTH=227
- Repeat List (scaffold1860)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17086.1 |
1 |
246 |
247 |
51.82 |
246 |
52 |
9e-66
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PIP3_9ROSI |
1 |
226 |
227 |
99.55 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca17086.1 |
26 |
246 |
247 |
47.36 |
221 |
53 |
2e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G23780.1 |
16 |
227 |
227 |
93.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1860 |
PASA |
mRNA |
10152 |
12265 |
. |
+ |
. |
ID=Dca17086.1;Parent=Dca17086 |
| scaffold1860 |
PASA |
exon |
10152 |
10347 |
. |
+ |
. |
ID=Dca17086.1.exon1;Parent=Dca17086.1 |
| scaffold1860 |
PASA |
exon |
11158 |
12265 |
. |
+ |
. |
ID=Dca17086.1.exon2;Parent=Dca17086.1 |
