Carnation DB

Dca1715.1

Annotation

7-exons
f-1
sp|B9SL81_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0091860#unknown#0F0P0C
AT2G42320.1 | Symbols: | nucleolar protein gar2-related | chr2:17628102-17630657 FORWARD LENGTH=669
Repeat List (scaffold1054)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1715.1	5	754	756	50.13	750	47	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SL81_RICCO	1	792	796	99.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1715.1	221	754	756	39.68	534	55	1e-161
Target_name	Start	End	Length	Cov(%)
AT2G42320.1	139	668	669	79.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1054	Augustus	mRNA	12206	15198	.	-	.	ID=Dca1715.1;Parent=Dca1715
scaffold1054	Augustus	exon	12206	12544	.	-	.	ID=Dca1715.1.exon1;Parent=Dca1715.1
scaffold1054	Augustus	exon	12640	12753	.	-	.	ID=Dca1715.1.exon2;Parent=Dca1715.1
scaffold1054	Augustus	exon	12849	13037	.	-	.	ID=Dca1715.1.exon3;Parent=Dca1715.1
scaffold1054	Augustus	exon	13173	13346	.	-	.	ID=Dca1715.1.exon4;Parent=Dca1715.1
scaffold1054	Augustus	exon	13456	13665	.	-	.	ID=Dca1715.1.exon5;Parent=Dca1715.1
scaffold1054	Augustus	exon	13876	14092	.	-	.	ID=Dca1715.1.exon6;Parent=Dca1715.1
scaffold1054	Augustus	exon	14171	15198	.	-	.	ID=Dca1715.1.exon7;Parent=Dca1715.1