Carnation DB

Dca1720.1

Annotation

8-exons
f-1
sp|O65842_MESCR#Small GTP-binding protein#Mesembryanthemum crystallinum (Common ice plant) (Cryophytum crystallinum)#Name=rab5B#GO:0005525;GO:0015031;GO:0007264#1F2P0C
Repeat List (scaffold1054)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1720.1	1	195	200	88.5	195	91	1e-100
Target_name	Start	End	Length	Cov(%)
sp\|O65842_MESCR	1	196	201	97.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1720.1	1	200	200	82.5	200	83	4e-93
Target_name	Start	End	Length	Cov(%)
AT3G54840.1	1	201	202	99.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1054	Augus-PASA	mRNA	64531	69691	.	-	.	ID=Dca1720.1;Parent=Dca1720
scaffold1054	Augus-PASA	exon	64531	64569	.	-	.	ID=Dca1720.1.exon1;Parent=Dca1720.1
scaffold1054	Augus-PASA	exon	66351	66437	.	-	.	ID=Dca1720.1.exon2;Parent=Dca1720.1
scaffold1054	Augus-PASA	exon	66593	66682	.	-	.	ID=Dca1720.1.exon3;Parent=Dca1720.1
scaffold1054	Augus-PASA	exon	68752	68857	.	-	.	ID=Dca1720.1.exon4;Parent=Dca1720.1
scaffold1054	Augus-PASA	exon	68948	69042	.	-	.	ID=Dca1720.1.exon5;Parent=Dca1720.1
scaffold1054	Augus-PASA	exon	69138	69221	.	-	.	ID=Dca1720.1.exon6;Parent=Dca1720.1
scaffold1054	Augus-PASA	exon	69346	69422	.	-	.	ID=Dca1720.1.exon7;Parent=Dca1720.1
scaffold1054	Augus-PASA	exon	69667	69691	.	-	.	ID=Dca1720.1.exon8;Parent=Dca1720.1