Carnation DB

Dca17379.1

Annotation

5-exons
f-1
sp|C5XLJ5_SORBI#Putative uncharacterized protein Sb03g035930#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb03g035930#unknown#0F0P0C
sp|G7ING5_MEDTR#TNP1#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_2g037270#GO:0008234;GO:0006508#1F1P0C
Repeat List (scaffold1883)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17379.1	86	345	353	23.22	260	31	5e-22
Target_name	Start	End	Length	Cov(%)
sp\|C5XLJ5_SORBI	111	358	800	31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17379.1	86	345	353	23.51	260	31	3e-21
Target_name	Start	End	Length	Cov(%)
Os05t0359000-00	224	472	673	36.99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1883	Augustus	mRNA	44878	47843	.	-	.	ID=Dca17379.1;Parent=Dca17379
scaffold1883	Augustus	exon	44878	45045	.	-	.	ID=Dca17379.1.exon1;Parent=Dca17379.1
scaffold1883	Augustus	exon	45152	45436	.	-	.	ID=Dca17379.1.exon2;Parent=Dca17379.1
scaffold1883	Augustus	exon	45562	45780	.	-	.	ID=Dca17379.1.exon3;Parent=Dca17379.1
scaffold1883	Augustus	exon	46478	46748	.	-	.	ID=Dca17379.1.exon4;Parent=Dca17379.1
scaffold1883	Augustus	exon	47725	47843	.	-	.	ID=Dca17379.1.exon5;Parent=Dca17379.1