Carnation DB

Dca17628.1

Annotation

6-exons
f-1
sp|F6HMY0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g03690#unknown#0F0P0C
AT1G12790.1 | Symbols: | CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:4359597-4361222 REVERSE LENGTH=250
Repeat List (scaffold19)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17628.1	57	194	229	45.41	138	76	7e-59
Target_name	Start	End	Length	Cov(%)
sp\|F6HMY0_VITVI	20	157	248	55.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca17628.1	59	194	229	37.11	136	63	4e-47
Target_name	Start	End	Length	Cov(%)
AT1G12790.1	24	159	250	54.4

seqname	source	feature	start	end	score	strand	frame	group
scaffold19	Augustus	mRNA	348317	349755	.	-	.	ID=Dca17628.1;Parent=Dca17628
scaffold19	Augustus	exon	348317	348423	.	-	.	ID=Dca17628.1.exon1;Parent=Dca17628.1
scaffold19	Augustus	exon	348590	348684	.	-	.	ID=Dca17628.1.exon2;Parent=Dca17628.1
scaffold19	Augustus	exon	348783	348878	.	-	.	ID=Dca17628.1.exon3;Parent=Dca17628.1
scaffold19	Augustus	exon	348960	349048	.	-	.	ID=Dca17628.1.exon4;Parent=Dca17628.1
scaffold19	Augustus	exon	349128	349264	.	-	.	ID=Dca17628.1.exon5;Parent=Dca17628.1
scaffold19	Augustus	exon	349590	349755	.	-	.	ID=Dca17628.1.exon6;Parent=Dca17628.1