Dca1778.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold10574)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1778.1 |
1 |
139 |
144 |
46.52 |
139 |
49 |
8e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
698 |
826 |
1313 |
9.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1778.1 |
1 |
48 |
144 |
17.36 |
48 |
52 |
2e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
668 |
716 |
1428 |
3.43 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10574 |
Augustus |
mRNA |
12075 |
12651 |
. |
+ |
. |
ID=Dca1778.1;Parent=Dca1778 |
| scaffold10574 |
Augustus |
exon |
12075 |
12223 |
. |
+ |
. |
ID=Dca1778.1.exon1;Parent=Dca1778.1 |
| scaffold10574 |
Augustus |
exon |
12366 |
12651 |
. |
+ |
. |
ID=Dca1778.1.exon2;Parent=Dca1778.1 |
