Carnation DB

Dca1807.1

Annotation

6-exons
f-1
sp|F6HIR3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0042g00830#GO:0003677;GO:0008270#2F0P0C
Os02t0828900-01 Transcription factor jumonji domain containing protein.
Repeat List (scaffold1059)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1807.1	210	575	575	29.73	366	46	3e-83
Target_name	Start	End	Length	Cov(%)
sp\|F6HIR3_VITVI	476	818	1215	28.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1807.1	163	575	575	27.13	413	38	3e-65
Target_name	Start	End	Length	Cov(%)
Os02t0828900-01	116	500	996	38.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1059	Augustus	mRNA	735	3536	.	-	.	ID=Dca1807.1;Parent=Dca1807
scaffold1059	Augustus	exon	735	1401	.	-	.	ID=Dca1807.1.exon1;Parent=Dca1807.1
scaffold1059	Augustus	exon	1484	1547	.	-	.	ID=Dca1807.1.exon2;Parent=Dca1807.1
scaffold1059	Augustus	exon	1833	1974	.	-	.	ID=Dca1807.1.exon3;Parent=Dca1807.1
scaffold1059	Augustus	exon	2071	2170	.	-	.	ID=Dca1807.1.exon4;Parent=Dca1807.1
scaffold1059	Augustus	exon	2682	2797	.	-	.	ID=Dca1807.1.exon5;Parent=Dca1807.1
scaffold1059	Augustus	exon	2898	3536	.	-	.	ID=Dca1807.1.exon6;Parent=Dca1807.1