Dca18074.1
Annotation
- 4-exons
- f-1
- sp|A5B919_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002640#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold1929)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18074.1 |
1 |
1379 |
1379 |
54.89 |
1379 |
52 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B919_VITVI |
1 |
1450 |
1450 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18074.1 |
343 |
1369 |
1379 |
26.54 |
1027 |
35 |
1e-158
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
377 |
1389 |
1401 |
72.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1929 |
Augustus |
mRNA |
16804 |
21181 |
. |
+ |
. |
ID=Dca18074.1;Parent=Dca18074 |
| scaffold1929 |
Augustus |
exon |
16804 |
17626 |
. |
+ |
. |
ID=Dca18074.1.exon1;Parent=Dca18074.1 |
| scaffold1929 |
Augustus |
exon |
17710 |
19208 |
. |
+ |
. |
ID=Dca18074.1.exon2;Parent=Dca18074.1 |
| scaffold1929 |
Augustus |
exon |
19283 |
20572 |
. |
+ |
. |
ID=Dca18074.1.exon3;Parent=Dca18074.1 |
| scaffold1929 |
Augustus |
exon |
20654 |
21181 |
. |
+ |
. |
ID=Dca18074.1.exon4;Parent=Dca18074.1 |
