Dca1822.1
Annotation
- 3-exons
- f-1
- sp|B6REK6_9BRAS#Copia-like pol polyprotein#Boechera divaricarpa#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold10592)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1822.1 |
12 |
92 |
98 |
68.36 |
81 |
83 |
5e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B6REK6_9BRAS |
703 |
783 |
931 |
8.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1822.1 |
3 |
80 |
364 |
10.16 |
78 |
47 |
1e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
686 |
764 |
1428 |
5.53 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10592 |
Augustus |
mRNA |
3586 |
5337 |
. |
+ |
. |
ID=Dca1822.1;Parent=Dca1822 |
| scaffold10592 |
Augustus |
exon |
3586 |
4679 |
. |
+ |
. |
ID=Dca1822.1.exon1;Parent=Dca1822.1 |
| scaffold10592 |
Augustus |
exon |
4930 |
5238 |
. |
+ |
. |
ID=Dca1822.1.exon2;Parent=Dca1822.1 |
| scaffold10592 |
Augustus |
exon |
5313 |
5337 |
. |
+ |
. |
ID=Dca1822.1.exon3;Parent=Dca1822.1 |
