Carnation DB

Dca18248.1

Annotation

7-exons
f-1
sp|F6H350_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g06860#GO:0008234;GO:0004221;GO:0008270;GO:0006511#3F1P0C
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | chr5:3410638-3412559 FORWARD LENGTH=557
Repeat List (scaffold194)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18248.1	233	682	683	42.75	450	65	7e-167
Target_name	Start	End	Length	Cov(%)
sp\|F6H350_VITVI	111	553	553	80.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18248.1	233	681	683	37.48	449	55	3e-129
Target_name	Start	End	Length	Cov(%)
AT5G10790.1	111	557	557	80.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold194	Augustus	mRNA	105991	113765	.	+	.	ID=Dca18248.1;Parent=Dca18248
scaffold194	Augustus	exon	105991	106172	.	+	.	ID=Dca18248.1.exon1;Parent=Dca18248.1
scaffold194	Augustus	exon	107073	107311	.	+	.	ID=Dca18248.1.exon2;Parent=Dca18248.1
scaffold194	Augustus	exon	107650	107798	.	+	.	ID=Dca18248.1.exon3;Parent=Dca18248.1
scaffold194	Augustus	exon	108017	108142	.	+	.	ID=Dca18248.1.exon4;Parent=Dca18248.1
scaffold194	Augustus	exon	111374	111822	.	+	.	ID=Dca18248.1.exon5;Parent=Dca18248.1
scaffold194	Augustus	exon	112605	112723	.	+	.	ID=Dca18248.1.exon6;Parent=Dca18248.1
scaffold194	Augustus	exon	112978	113765	.	+	.	ID=Dca18248.1.exon7;Parent=Dca18248.1