Dca18313.1
Annotation
- 3-exons
- f-1
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold1943)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18313.1 |
272 |
1181 |
1202 |
50.41 |
910 |
63 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FZN9_ARATH |
877 |
1844 |
1864 |
51.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18313.1 |
289 |
1099 |
1202 |
21.88 |
811 |
32 |
8e-89
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
523 |
1285 |
1539 |
49.57 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1943 |
Augustus |
mRNA |
44141 |
48164 |
. |
+ |
. |
ID=Dca18313.1;Parent=Dca18313 |
| scaffold1943 |
Augustus |
exon |
44141 |
44776 |
. |
+ |
. |
ID=Dca18313.1.exon1;Parent=Dca18313.1 |
| scaffold1943 |
Augustus |
exon |
45051 |
47705 |
. |
+ |
. |
ID=Dca18313.1.exon2;Parent=Dca18313.1 |
| scaffold1943 |
Augustus |
exon |
47847 |
48164 |
. |
+ |
. |
ID=Dca18313.1.exon3;Parent=Dca18313.1 |
