Carnation DB

Dca18460.1

Annotation

12-exons
f-1
sp|F6GSX2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g07630#GO:0005667;GO:0003677;GO:0003700;GO:0006351#2F1P1C
sp|B9R8Z0_RICCO#E2F, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1512740#GO:0005667;GO:0003677;GO:0003700;GO:0006351#2F1P1C
Repeat List (scaffold1954)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18460.1	10	374	405	58.76	365	64	2e-122
Target_name	Start	End	Length	Cov(%)
sp\|F6GSX2_VITVI	10	373	376	96.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18460.1	14	369	405	49.62	356	56	1e-103
Target_name	Start	End	Length	Cov(%)
AT3G48160.2	28	391	403	90.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1954	Augustus	mRNA	26434	29261	.	+	.	ID=Dca18460.1;Parent=Dca18460
scaffold1954	Augustus	exon	26434	26525	.	+	.	ID=Dca18460.1.exon1;Parent=Dca18460.1
scaffold1954	Augustus	exon	26630	26697	.	+	.	ID=Dca18460.1.exon2;Parent=Dca18460.1
scaffold1954	Augustus	exon	26804	26856	.	+	.	ID=Dca18460.1.exon3;Parent=Dca18460.1
scaffold1954	Augustus	exon	27302	27379	.	+	.	ID=Dca18460.1.exon4;Parent=Dca18460.1
scaffold1954	Augustus	exon	27484	27537	.	+	.	ID=Dca18460.1.exon5;Parent=Dca18460.1
scaffold1954	Augustus	exon	27628	27721	.	+	.	ID=Dca18460.1.exon6;Parent=Dca18460.1
scaffold1954	Augustus	exon	27842	27912	.	+	.	ID=Dca18460.1.exon7;Parent=Dca18460.1
scaffold1954	Augustus	exon	28001	28073	.	+	.	ID=Dca18460.1.exon8;Parent=Dca18460.1
scaffold1954	Augustus	exon	28164	28225	.	+	.	ID=Dca18460.1.exon9;Parent=Dca18460.1
scaffold1954	Augustus	exon	28499	28898	.	+	.	ID=Dca18460.1.exon10;Parent=Dca18460.1
scaffold1954	Augustus	exon	29003	29065	.	+	.	ID=Dca18460.1.exon11;Parent=Dca18460.1
scaffold1954	Augustus	exon	29152	29261	.	+	.	ID=Dca18460.1.exon12;Parent=Dca18460.1