Dca18480.1
Annotation
- 4-exons
- f-1
- sp|E7BQD5_SILLA#Gag-pol polyprotein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1957)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18480.1 |
582 |
651 |
946 |
4.43 |
70 |
60 |
1e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E7BQD5_SILLA |
272 |
341 |
1475 |
4.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18480.1 |
655 |
713 |
946 |
2.43 |
59 |
38 |
3e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G13320.1 |
156 |
216 |
216 |
28.24 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1957 |
Augustus |
mRNA |
10518 |
14657 |
. |
- |
. |
ID=Dca18480.1;Parent=Dca18480 |
| scaffold1957 |
Augustus |
exon |
10518 |
11408 |
. |
- |
. |
ID=Dca18480.1.exon1;Parent=Dca18480.1 |
| scaffold1957 |
Augustus |
exon |
11855 |
12034 |
. |
- |
. |
ID=Dca18480.1.exon2;Parent=Dca18480.1 |
| scaffold1957 |
Augustus |
exon |
12797 |
14153 |
. |
- |
. |
ID=Dca18480.1.exon3;Parent=Dca18480.1 |
| scaffold1957 |
Augustus |
exon |
14245 |
14657 |
. |
- |
. |
ID=Dca18480.1.exon4;Parent=Dca18480.1 |
