Dca18489.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold19578)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18489.1 |
82 |
346 |
347 |
50.72 |
265 |
66 |
3e-98
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
771 |
1036 |
1501 |
17.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18489.1 |
82 |
284 |
347 |
24.49 |
203 |
42 |
4e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
797 |
998 |
1539 |
13.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold19578 |
Augustus |
mRNA |
2549 |
5033 |
. |
+ |
. |
ID=Dca18489.1;Parent=Dca18489 |
| scaffold19578 |
Augustus |
exon |
2549 |
2792 |
. |
+ |
. |
ID=Dca18489.1.exon1;Parent=Dca18489.1 |
| scaffold19578 |
Augustus |
exon |
4234 |
5033 |
. |
+ |
. |
ID=Dca18489.1.exon2;Parent=Dca18489.1 |
