Carnation DB

Dca1853.1

Annotation

6-exons
f-1
sp|B9RZK5_RICCO#Sensor histidine kinase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0999330#GO:0005634;GO:0003677;GO:0016301;GO:0000156;GO:0006355#3F1P1C
Repeat List (scaffold106)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1853.1	1	646	648	60.49	646	57	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RZK5_RICCO	1	682	682	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1853.1	28	646	648	49.84	619	50	1e-142
Target_name	Start	End	Length	Cov(%)
AT4G16110.1	22	664	664	96.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold106	Augus-PASA	mRNA	149446	153418	.	-	.	ID=Dca1853.1;Parent=Dca1853
scaffold106	Augus-PASA	exon	149446	149520	.	-	.	ID=Dca1853.1.exon1;Parent=Dca1853.1
scaffold106	Augustus	exon	149687	150778	.	-	.	ID=Dca1853.1.exon2;Parent=Dca1853.1
scaffold106	Augustus	exon	151069	151145	.	-	.	ID=Dca1853.1.exon3;Parent=Dca1853.1
scaffold106	Augustus	exon	151617	151988	.	-	.	ID=Dca1853.1.exon4;Parent=Dca1853.1
scaffold106	Augustus	exon	152460	152612	.	-	.	ID=Dca1853.1.exon5;Parent=Dca1853.1
scaffold106	Augustus	exon	153241	153418	.	-	.	ID=Dca1853.1.exon6;Parent=Dca1853.1