Carnation DB

Dca1860.1

Annotation

18-exons
f-1
sp|D7SZN5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0049g01840#GO:0000151;GO:0004842#1F0P1C
Os10t0466300-02 Similar to Yarrowia lipolytica chromosome C of strain CLIB99 of Yarrowia lipolytica.
Repeat List (scaffold106)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1860.1	1	524	524	79.58	524	80	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SZN5_VITVI	1	524	524	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1860.1	1	519	524	73.47	519	75	0
Target_name	Start	End	Length	Cov(%)
Os10t0466300-02	1	516	528	97.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold106	Augus-PASA	mRNA	204484	211511	.	-	.	ID=Dca1860.1;Parent=Dca1860
scaffold106	Augus-PASA	exon	204484	204599	.	-	.	ID=Dca1860.1.exon1;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	204717	204787	.	-	.	ID=Dca1860.1.exon2;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	204894	204945	.	-	.	ID=Dca1860.1.exon3;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	205070	205166	.	-	.	ID=Dca1860.1.exon4;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	205262	205339	.	-	.	ID=Dca1860.1.exon5;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	205436	205552	.	-	.	ID=Dca1860.1.exon6;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	205679	205783	.	-	.	ID=Dca1860.1.exon7;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	206511	206585	.	-	.	ID=Dca1860.1.exon8;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	206809	206871	.	-	.	ID=Dca1860.1.exon9;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	206983	207078	.	-	.	ID=Dca1860.1.exon10;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	207190	207306	.	-	.	ID=Dca1860.1.exon11;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	207519	207640	.	-	.	ID=Dca1860.1.exon12;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	207734	207878	.	-	.	ID=Dca1860.1.exon13;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	208547	208633	.	-	.	ID=Dca1860.1.exon14;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	209206	209268	.	-	.	ID=Dca1860.1.exon15;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	209353	209424	.	-	.	ID=Dca1860.1.exon16;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	211270	211355	.	-	.	ID=Dca1860.1.exon17;Parent=Dca1860.1
scaffold106	Augus-PASA	exon	211499	211511	.	-	.	ID=Dca1860.1.exon18;Parent=Dca1860.1