Carnation DB

Dca18739.1

Annotation

6-exons
f-1
sp|F6HR60_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g01230#GO:0016021;GO:0055085#0F1P1C
Os06t0232300-01 Similar to Auxin transport protein REH1.
Repeat List (scaffold1974)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18739.1	1	587	587	79.55	587	79	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HR60_VITVI	23	597	597	96.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18739.1	1	587	587	67.63	587	66	0
Target_name	Start	End	Length	Cov(%)
Os06t0232300-01	23	592	593	96.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1974	Augustus	mRNA	1	2931	.	+	.	ID=Dca18739.1;Parent=Dca18739
scaffold1974	Augustus	exon	1	1102	.	+	.	ID=Dca18739.1.exon1;Parent=Dca18739.1
scaffold1974	Augustus	exon	1877	2150	.	+	.	ID=Dca18739.1.exon2;Parent=Dca18739.1
scaffold1974	Augustus	exon	2241	2326	.	+	.	ID=Dca18739.1.exon3;Parent=Dca18739.1
scaffold1974	Augustus	exon	2417	2574	.	+	.	ID=Dca18739.1.exon4;Parent=Dca18739.1
scaffold1974	Augustus	exon	2666	2742	.	+	.	ID=Dca18739.1.exon5;Parent=Dca18739.1
scaffold1974	Augustus	exon	2865	2931	.	+	.	ID=Dca18739.1.exon6;Parent=Dca18739.1