Dca1875.1
Annotation
- 2-exons
- f-1
- sp|Q9SL06_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05610#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1060)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1875.1 |
39 |
301 |
334 |
48.5 |
263 |
53 |
2e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SL06_ARATH |
299 |
608 |
780 |
39.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1875.1 |
39 |
334 |
334 |
33.83 |
296 |
33 |
2e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
893 |
1232 |
1539 |
22.09 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1060 |
Augustus |
mRNA |
5240 |
6379 |
. |
- |
. |
ID=Dca1875.1;Parent=Dca1875 |
| scaffold1060 |
Augustus |
exon |
5240 |
6014 |
. |
- |
. |
ID=Dca1875.1.exon1;Parent=Dca1875.1 |
| scaffold1060 |
Augustus |
exon |
6150 |
6379 |
. |
- |
. |
ID=Dca1875.1.exon2;Parent=Dca1875.1 |
