Dca1878.1
Annotation
- 4-exons
- f-1
- sp|A5ATR1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0006g01890#unknown#0F0P0C
- Os01t0507500-01 Transcription elognation factor Eaf, N-terminal domain containing protein.
- Repeat List (scaffold1060)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1878.1 |
241 |
353 |
398 |
15.32 |
113 |
54 |
5e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5ATR1_VITVI |
169 |
281 |
344 |
32.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1878.1 |
241 |
361 |
398 |
12.56 |
121 |
42 |
3e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0507500-01 |
160 |
274 |
320 |
35.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1060 |
Augustus |
mRNA |
23080 |
27204 |
. |
+ |
. |
ID=Dca1878.1;Parent=Dca1878 |
| scaffold1060 |
Augustus |
exon |
23080 |
23200 |
. |
+ |
. |
ID=Dca1878.1.exon1;Parent=Dca1878.1 |
| scaffold1060 |
Augustus |
exon |
23345 |
23745 |
. |
+ |
. |
ID=Dca1878.1.exon2;Parent=Dca1878.1 |
| scaffold1060 |
Augustus |
exon |
26025 |
26262 |
. |
+ |
. |
ID=Dca1878.1.exon3;Parent=Dca1878.1 |
| scaffold1060 |
Augus-PASA |
exon |
26768 |
27204 |
. |
+ |
. |
ID=Dca1878.1.exon4;Parent=Dca1878.1 |
