Carnation DB

Dca18825.1

Annotation

6-exons
f-1
sp|B9IC46_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1098089#GO:0003723#1F0P0C
sp|E6NU21_9ROSI#JHL05D22.2 protein#Jatropha curcas#Name=JHL05D22.2#GO:0003723#1F0P0C
Repeat List (scaffold198)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18825.1	3	362	769	29.12	360	57	1e-109
Target_name	Start	End	Length	Cov(%)
sp\|B9IC46_POPTR	4	370	405	90.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18825.1	69	358	769	23.4	290	56	4e-96
Target_name	Start	End	Length	Cov(%)
AT4G31010.1	67	368	405	74.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold198	Augustus	mRNA	216092	221997	.	-	.	ID=Dca18825.1;Parent=Dca18825
scaffold198	Augustus	exon	216092	217261	.	-	.	ID=Dca18825.1.exon1;Parent=Dca18825.1
scaffold198	Augustus	exon	218376	218516	.	-	.	ID=Dca18825.1.exon2;Parent=Dca18825.1
scaffold198	Augustus	exon	219759	219886	.	-	.	ID=Dca18825.1.exon3;Parent=Dca18825.1
scaffold198	Augustus	exon	220296	220410	.	-	.	ID=Dca18825.1.exon4;Parent=Dca18825.1
scaffold198	Augustus	exon	220711	220838	.	-	.	ID=Dca18825.1.exon5;Parent=Dca18825.1
scaffold198	Augustus	exon	221370	221997	.	-	.	ID=Dca18825.1.exon6;Parent=Dca18825.1