Dca1891.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold10605)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1891.1 |
134 |
908 |
967 |
38.67 |
775 |
46 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
11 |
774 |
1717 |
44.49 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1891.1 |
671 |
764 |
967 |
3.61 |
94 |
38 |
1e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
97 |
189 |
192 |
48.43 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10605 |
Augustus |
mRNA |
6450 |
10102 |
. |
- |
. |
ID=Dca1891.1;Parent=Dca1891 |
| scaffold10605 |
Augustus |
exon |
6450 |
6883 |
. |
- |
. |
ID=Dca1891.1.exon1;Parent=Dca1891.1 |
| scaffold10605 |
Augustus |
exon |
6992 |
9234 |
. |
- |
. |
ID=Dca1891.1.exon2;Parent=Dca1891.1 |
| scaffold10605 |
Augustus |
exon |
9791 |
9882 |
. |
- |
. |
ID=Dca1891.1.exon3;Parent=Dca1891.1 |
| scaffold10605 |
Augustus |
exon |
9968 |
10102 |
. |
- |
. |
ID=Dca1891.1.exon4;Parent=Dca1891.1 |
